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Image Search Results
Journal: Scientific Reports
Article Title: DeepAction: a MATLAB toolbox for automated classification of animal behavior in video
doi: 10.1038/s41598-023-29574-0
Figure Lengend Snippet: Example usage of the MATLAB apps included in the toolbox. ( A ) GUI for defining the set of behaviors in a dataset. Each behavior label corresponds to a unique keyboard key (“key”), which is used to designate the start and stop of behaviors during manual annotation. ( B ) An example of the annotation GUI used in confidence-based review to correct false classifier-produced predictions. It features tables of the complete (i.e., human annotated or reviewed) and unreviewed (i.e., classifier-annotated) clips in the project. During review, the tables include a confidence score for each clip (“score”) as well as an estimated overall accuracy for all unannotated data. Users select clips to review from the annotation tables, which are then shown in the video viewer box (top left) along with their predicted labels. Users create or correct the labels of the behaviors appearing in the video, with both annotation and video playback controlled via keyboard. Behaviors and their corresponding keystrokes are shown in the “Behavior Labels” panel. After completing the annotation of each clip, users press the “Mark Complete” button to save their progress.
Article Snippet: Finally, we release the code and
Techniques: Produced
Journal: eNeuro
Article Title: BrainWAVE: A Flexible Method for Noninvasive Stimulation of Brain Rhythms across Species
doi: 10.1523/ENEURO.0257-22.2022
Figure Lengend Snippet: A user-friendly BrainWAVE graphical user interface (GUI) to perform many types of experiments. We developed a user-friendly application to run a variety of experiments involving visual and/or auditory stimulation. Preprogramed tasks are found under the task dropdown menu and include four different tasks. First, a classical flicker task, with exposure to 5.5 Hz (θ-like), 40 Hz (γ-like), 80 Hz, and random nonperiodic flicker at visual, audiovisual and auditory modalities. Second, a flicker duration task, exposing subjects to a given modality and frequency of flicker for minutes at a time. Third, a flicker frequency task, which allows exposing subjects to up to 26 different frequencies of flicker of a given modality. Fourth, a single pulse evoked potential task, where subjects are exposed to single visual, audiovisual and auditory 12.5-ms pulses. The stimuli parameters are set in entry boxes for stimulus duty cycle and tone (sound frequency). The comments box is used to write and save time-stamped experiment notes during the experiment. Developed for testing in human participants, each task includes tests for comfort to determine the optimal brightness and volume of the stimuli that are comfortable to the subject (adjusted on the device), tests for safety to determine whether the intended flicker stimuli induce adverse events, experimental tasks, control occluded condition (where subjects wear a sleep mask and earplugs), and measures of brightness and volume used. See , BrainWAVE stimulator guide, for instructions on how to set-up and run an experiment using the BrainWAVE GUI.
Article Snippet: For flexible adjustment of stimulus parameters, we developed a user-friendly
Techniques: Control